I thought I’d share with you guys and warn you. I’m half-arsed to even bother contacting Moog at this point, but I found a concerning bug with the sequencer today. Simply put, it started automatically transposing recorded notes down by like 3 octaves. Very bizarre, but thankfully restarting the synth resolved the issue. But it is pretty disappointing we’re still having such severe bugs 6 months later. I love the Muse’s design and sound, but it feels like Moog still hasn’t figured out how to quality test their polysynths 
I haven’t lost hope and I still love the Muse, but all these digital blunders are pretty unnerving.
Moog just can’t write stable software is the issue. They need to expand their coding team.
I would like to help. Who do I have to contact?
Strider, I haven’t come a cross this yet despite using the seq a lot. Keeping my fingers crossed. Don’t know if it would help…but there is a setting in the sequencer expand button menu something to the effect of allowing scaled notes when entering sequence. I’m not in front of instrument now, but make sure that’s off
Did you get this sorted? I’m having the same issue. It makes the sequencer pretty unusable. When I record the sequencer MIDI, the notes are in the lowest octave possible in Ableton Live. Not sure if it’s a bug or my settings are wrong somewhere.